Laboratory for Large-Scale Biomedical Data Technology

Genomic data management technologies connecting to new biological findinging

 

PI_photo  

Team Leader
Takeya KASUKAWA  Ph.D.

1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045

takeya.kasukawa[at]riken.jp

Research Area

Today, life scientists need to find and investigate various achievements and findings from published journals and databases, and collect and annotate additional information for their further studies each by each. This requires additional data management tasks in their research activities. Our mission is developing technologies for achieving efficient genomics data management as follows.
(1) Research and development of element technologies for systems to manage large-scale genomics data in proper, efficient and sustainable manners.
(2) Constructing reference data set to compare various large-scale genomics data.
Along with these developments, we are going to set up computational infrastructure that is adequate. These activities could contribute to address increasingly larger amount of next generation sequencing data produced inside and outside the division, in order to utilize such knowledge to further applied researches including drug discoveries and medical practices.

 

News

2017/08/30 The FANTOM contribution to open science
2017/08/22 FANTOM5 releases first integrated atlas of microRNA expression in human primary cells
2017/03/02 Improved gene expression atlas shows that many human long non-coding RNAs may actually be functional
2017/02/15 FANTOM5 data contributes data of The Human Protein Atlas
2016/08/05 Continuously extensible database provides insights into our cells
2015/02/13 FANTOM5 project discovers general rules governing how cells change
2014/03/27 FANTOM5 releases atlas of human gene expression
2014/03/10 A new bioinformatics tool to visualize transcriptomes