Laboratory for Immunogenetics

Publications List

 

1. Mostafa D, Yanagiya A, Georgiadou E, Wu Y, Stylianides T, Rutter GA, Suzuki T, Yamamoto T. Loss of β-cell identity and diabetic phenotype in mice caused by disruption of CNOT3-dependent mRNA deadenylation. Commun Biol  3(1):476. doi: 10.1038/s42003-020-01201-y. (2020)

 

2. Aso H, Nagaoka S, Kawakami E, Ito J, Islam S, Tan B J Y, Nakaoka S, Ashizaki K, Shiroguchi K, Suzuki Y, Satou Y, Koyanagi Y, Sato K. Multiomics investigation revealing the characteristics 1 of HIV-1-infected cells. Cell Reports 32, 107887 (2020).

 

3. Otsuka H, Fukao A, Tomohiro T, Adachi S, Suzuki T, Takahashi A, Funakami Y, Natsume T, Yamamoto T, Duncan KE, Fujiwara T. ARE-binding Protein ZFP36L1 Interacts With CNOT1 to Directly Repress Translation via a Deadenylation-Independent Mechanism. Biochimie 174:49-56. doi: 10.1016/j.biochi.2020.04.010 (2020).

 

4. Takahashi A, Suzuki T, Soeda S, Takaoka S, Kobori S, Yamaguchi T, Mohamed HMA, Yanagiya A, Abe T, Shigeta M, Furuta Y, Kuba K, Yamamoto T. The CCR4-NOT Complex Maintains Liver Homeostasis Through mRNA Deadenylation. Life Sci Alliance  3(5):e201900494. doi: 10.26508/lsa.201900494 (2020).

 

5. Sugawara S, Kanamaru Y, Sekine S, Maekawa L, Takahashi A, Yamamoto T, Watanabe K, Fujisawa T, Hattori K, Ichijo H. The Mitochondrial Protein PGAM5 Suppresses Energy Consumption in Brown Adipocytes by Repressing Expression of Uncoupling Protein 1. J Biol Chem 295(17):5588-5601. doi: 10.1074/jbc.RA119.011508 (2020).

 

6. Kimura S, Nakamura Y, Kobayashi N, Shiroguchi K, Kawakami E, Mutoh M, Takahashi-Iwanaga H, Yamada T, Hisamoto M, Nakamura M, Udagawa N, Sato S, Kaisho T, Iwanaga T, Hase K. Osteoprotegerin-dependent M cell self-regulation balances gut infection and immunity. Nat Commun 11,234 doi: 10.1038/s41467-019-13883-y (2020).

 

7. Mostafa D, Takahashi A, Yanagiya A, Yamaguchi T, Abe T, Kureha T, Kuba K, Kanegae Y, Furuta Y, Yamamoto T, Suzuki T. Essential functions of the CNOT7/8 catalytic subunits of the CCR4-NOT complex in mRNA regulation and cell viability. RNA Biol doi: 10.1080/15476286.2019.1709747 (2020).

 

8. Suzuki T, Kikuguchi C, Nishijima S, Yamamoto T. Insufficient liver maturation affects murine early postnatal hair cycle. Biochem Biophys Res Commun 521,172-177 (2020).

 

9. Yazaki J, Kawashima Y, Ogawa T, Kobayashi A, Okoshi M, Watanabe T, Yoshida S, Kii I, Egami S, Amagai M, Hosoya T, Shiroguchi K, Ohara O. HaloTag-based conjugation of proteins to barcoding-oligonucleotides. Nucleic Acids Res 48 doi: 10.1093/nar/gkz1086 (2019).

 

10. Horie K, Kato T, Kudo T, Sasanuma H, Miyauchi M, Akiyama N, Miyao T, Seki T, Ishikawa T, Takakura Y, Shirakawa M, Shiba D, Hamada M, Jeon H, Yoshida N, Inoue JI, Muratani M, Takahashi S, Ohno H, Akiyama T. Impact of spaceflight on the murine thymus and mitigation by exposure to artificial gravity during spaceflight. Sci.Rep 9, 19866 (2019).

 

11. Takahashi A, Takaoka S, Kobori S, Yamaguchi T, Ferwati S, Kuba K, Yamamoto T, Suzuki T. The CCR4-NOT deadenylase complex maintains adipocyte identity. Int J Mol Sci 20 (2019).

 

12. Baba M, Yokoyama K, Seiriki K, Naka Y, Matsumura K, Kondo M, Yamamoto K, Hayashida M, Kasai A, Ago Y, Nagayasu K, Hayata-Takano A, Takahashi A, Yamaguchi S, Mori D, Ozaki N, Yamamoto T, Takuma K, Hashimoto R, Hashimoto H, Nakazawa T. Psychiatric-disorder-related behavioral phenotypes and cortical hyperactivity in a mouse model of 3q29 deletion syndrome. Neuropsycopharacology 44, 2125-2135 (2019).

 

13. Suzuki T, Kikuguchi C, Nishijima S, Nagashima T, Takahashi A, Okada M, Yamamoto T. Postnatal liver functional maturation requires Cnot complex-mediated decay of mRNAs encoding cell cycle and immature liver genes. Development 146 (2019).

 

14. Miyamoto C, Kojo S, Yamashita M, Moro K, Lacaud G, Shiroguchi K, Taniuchi I, Ebihara T. Runx/Cbfβ complexes protect group 2 innate lymphoid cells from exhausted-like hyporesponsiveness during allergic airway inflammation. Nat. Commun 10, 447, 1-13 (2019).

 

15. Shirai YT, Mizutani A, Nishijima S, Horie M, Kikuguchi C, Elisseeva O, Yamamoto T. CNOT3 targets negative cell cycle regulators in non-small cell lung cancer development. Oncogene 38,2580-2594 (2019).

 

16. Ise W, Fujii K, Shiroguchi K, Ito A, Kometani K, Takeda K, Kawakami E, Yamashita K, Suzuki K, Okada T, Kurosaki T. T follicular helper cell-germinal center B cell interaction strength regulates entry into plasma cell or recycling GC cell fate. Immunity 48, 702-715 (2018).

 

17. Tenno M, Kojo S, Lawir D.-F, Hess I, Shiroguchi K, Ebihara T, Endo T.A, Muroi S, Satoh R, Kawamoto H, Boehm T, Taniuchi I. Cbfβ2 controls differentiation of and confers homing capacity to prethymic progenitors. J. Exp. Med 215, 595-610 (2018).

 

18. Ogawa T, Kryukov K, Imanishi T, Shiroguchi K. The efficacy and further functional advantages of random-base molecular barcodes for absolute and digital quantification of nucleic acid molecules. Sci.Rep 7, 13576 (2017).

 

19. Tenno M, Shiroguchi K, Muroi S, Kawakami E, Koseki K, Kryukov K, Imanishi T, Ginhoux F, Taniuchi I. Cbfβ2 deficiency preserves Langerhans cell precursors by lack of selective TGFβ receptor signaling. J. Exp. Med 214, 2933-2946 (2017).

 

20. Hayatsu N, Miyao T, Tachibana M, Murakami R, Kimura A, Kato T, Kawakami E, Endo TA, Setoguchi R, Watarai H, Nishikawa T, Yasuda T, Yoshida H, Hori S. Analyses of a Mutant Foxp3 Allele Reveal BATF as a Critical Transcription Factor in the Differentiation and Accumulation of Tissue Regulatory T Cells. Immunity 47, 268-283 (2017).

 

21. Suzuki H, Mitsuno K, Shiroguchi K, Tsugane M, Okano T, Dohi T, Tsuji T. One-step micromolding of complex 3D microchambers for single-cell analysis. Lab. Chip 17, 647-652 (2017).

 

22. Li X, Morita M, Kikuguchi C, Takahashi A, Suzuki T and Yamamoto T. Adipocyte-specific disruption of mouse Cnot3 causes lipodystrophy. FEBS Letters 591, 358-368 (2017).